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Terbium in PDB 6frq: Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate.

Enzymatic activity of Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate.

All present enzymatic activity of Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate.:
3.2.1.17;

Protein crystallography data

The structure of Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate., PDB code: 6frq was solved by S.Engilberge, F.Riobe, S.Di Pietro, T.Wagner, S.Shima, E.Girard, E.Dumont, O.Maury, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.85 / 1.69
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 77.700, 77.700, 38.377, 90.00, 90.00, 90.00
R / Rfree (%) 20.1 / 23.9

Other elements in 6frq:

The structure of Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate. also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Terbium Binding Sites:

The binding sites of Terbium atom in the Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate. (pdb code 6frq). This binding sites where shown within 5.0 Angstroms radius around Terbium atom.
In total 2 binding sites of Terbium where determined in the Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate., PDB code: 6frq:
Jump to Terbium binding site number: 1; 2;

Terbium binding site 1 out of 2 in 6frq

Go back to Terbium Binding Sites List in 6frq
Terbium binding site 1 out of 2 in the Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate.


Mono view


Stereo pair view

A full contact list of Terbium with other atoms in the Tb binding site number 1 of Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Tb201

b:47.8
occ:0.80
OD2 A:ASP101 2.3 44.4 1.0
OD1 A:ASP101 2.7 50.1 1.0
CG A:ASP101 2.9 45.3 1.0
CB A:ASP101 4.4 37.2 1.0
H A:GLY102 4.4 39.5 1.0
HB2 A:ASP101 4.7 36.4 1.0
HB3 A:ASP101 4.8 36.5 1.0
HH2 A:TRP63 4.8 29.8 1.0

Terbium binding site 2 out of 2 in 6frq

Go back to Terbium Binding Sites List in 6frq
Terbium binding site 2 out of 2 in the Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate.


Mono view


Stereo pair view

A full contact list of Terbium with other atoms in the Tb binding site number 2 of Structure of Tetragonal Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Sodium Tartrate Tetrahydrate. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Tb202

b:41.2
occ:0.60
O A:HOH422 3.8 25.9 1.0

Reference:

S.Engilberge, F.Riobe, T.Wagner, S.Di Pietro, C.Breyton, B.Franzetti, S.Shima, E.Girard, E.Dumont, O.Maury. Unveiling the Binding Modes of the Crystallophore, A Terbium-Based Nucleating and Phasing Molecular Agent For Protein Crystallography. Chemistry V. 24 9739 2018.
ISSN: ISSN 1521-3765
PubMed: 29806881
DOI: 10.1002/CHEM.201802172
Page generated: Wed Dec 16 02:27:08 2020

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