Atomistry » Terbium » PDB 1m9s-6xym » 6h6n
Atomistry »
  Terbium »
    PDB 1m9s-6xym »
      6h6n »

Terbium in PDB 6h6n: Ubij-SCP2 Ubiquinone Synthesis Protein

Protein crystallography data

The structure of Ubij-SCP2 Ubiquinone Synthesis Protein, PDB code: 6h6n was solved by C.D.Fyfe, P.Legrand, L.Pecqueur, L.Ciccone, M.Lombard, M.Fontecave, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.29 / 2.12
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 48.300, 67.930, 73.080, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 22.9

Other elements in 6h6n:

The structure of Ubij-SCP2 Ubiquinone Synthesis Protein also contains other interesting chemical elements:

Calcium (Ca) 6 atoms

Terbium Binding Sites:

The binding sites of Terbium atom in the Ubij-SCP2 Ubiquinone Synthesis Protein (pdb code 6h6n). This binding sites where shown within 5.0 Angstroms radius around Terbium atom.
In total 2 binding sites of Terbium where determined in the Ubij-SCP2 Ubiquinone Synthesis Protein, PDB code: 6h6n:
Jump to Terbium binding site number: 1; 2;

Terbium binding site 1 out of 2 in 6h6n

Go back to Terbium Binding Sites List in 6h6n
Terbium binding site 1 out of 2 in the Ubij-SCP2 Ubiquinone Synthesis Protein


Mono view


Stereo pair view

A full contact list of Terbium with other atoms in the Tb binding site number 1 of Ubij-SCP2 Ubiquinone Synthesis Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Tb201

b:0.5
occ:1.00
O A:HOH356 3.4 66.3 1.0
OE2 A:GLU51 3.4 58.2 1.0
OE1 A:GLU51 3.4 55.2 1.0
CD A:GLU51 3.4 55.4 1.0
O A:HOH340 3.5 68.6 1.0
O A:HOH346 3.9 55.2 1.0
CG A:GLU51 4.3 38.8 1.0
OG A:SER58 4.7 50.4 1.0

Terbium binding site 2 out of 2 in 6h6n

Go back to Terbium Binding Sites List in 6h6n
Terbium binding site 2 out of 2 in the Ubij-SCP2 Ubiquinone Synthesis Protein


Mono view


Stereo pair view

A full contact list of Terbium with other atoms in the Tb binding site number 2 of Ubij-SCP2 Ubiquinone Synthesis Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Tb201

b:36.8
occ:0.40
OE2 B:GLU73 2.4 69.9 1.0
OE1 B:GLU73 2.4 67.3 1.0
O B:HOH340 2.7 64.0 1.0
CD B:GLU73 2.7 68.8 1.0
O B:HOH337 3.0 54.2 1.0
CG B:GLU73 4.2 47.0 1.0
O B:TRP74 4.5 43.6 1.0
O B:HOH321 5.0 51.0 1.0
N B:TRP74 5.0 36.8 1.0

Reference:

M.Hajj Chehade, L.Pelosi, C.D.Fyfe, L.Loiseau, B.Rascalou, S.Brugiere, K.Kazemzadeh, C.D.Vo, L.Ciccone, L.Aussel, Y.Coute, M.Fontecave, F.Barras, M.Lombard, F.Pierrel. A Soluble Metabolon Synthesizes the Isoprenoid Lipid Ubiquinone. Cell Chem Biol V. 26 482 2019.
ISSN: ESSN 2451-9456
PubMed: 30686758
DOI: 10.1016/J.CHEMBIOL.2018.12.001
Page generated: Fri Oct 11 08:37:47 2024

Last articles

Cl in 7WMI
Cl in 7WM7
Cl in 7WLW
Cl in 7WL9
Cl in 7WKZ
Cl in 7WKR
Cl in 7WGP
Cl in 7WK1
Cl in 7WHH
Cl in 7WGT
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy