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Terbium in PDB 8p2q: Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-Oh

Enzymatic activity of Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-Oh

All present enzymatic activity of Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-Oh:
3.2.1.17;

Protein crystallography data

The structure of Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-Oh, PDB code: 8p2q was solved by Z.Alsalman, E.Girard, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.57 / 1.69
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 77.143, 77.143, 37.695, 90, 90, 90
R / Rfree (%) 15.9 / 19.5

Other elements in 8p2q:

The structure of Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-Oh also contains other interesting chemical elements:

Chlorine (Cl) 5 atoms
Sodium (Na) 1 atom

Terbium Binding Sites:

The binding sites of Terbium atom in the Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-Oh (pdb code 8p2q). This binding sites where shown within 5.0 Angstroms radius around Terbium atom.
In total only one binding site of Terbium was determined in the Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-Oh, PDB code: 8p2q:

Terbium binding site 1 out of 1 in 8p2q

Go back to Terbium Binding Sites List in 8p2q
Terbium binding site 1 out of 1 in the Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-Oh


Mono view


Stereo pair view

A full contact list of Terbium with other atoms in the Tb binding site number 1 of Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-Oh within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Tb201

b:28.1
occ:0.75
 TB A:WRT201 0.0 28.1 0.8
H012 A:WRT201 1.6 46.8 0.8
N17 A:WRT201 2.3 23.9 0.8
OD2 A:ASP101 2.3 23.5 1.0
O27 A:WRT201 2.4 21.2 0.8
O26 A:WRT201 2.4 21.3 0.8
OD1 A:ASP101 2.5 25.9 1.0
C01 A:WRT201 2.5 39.0 0.8
N23 A:WRT201 2.6 24.2 0.8
N06 A:WRT201 2.7 26.6 0.8
H011 A:WRT201 2.7 46.8 0.8
CG A:ASP101 2.8 25.6 1.0
H32 A:WRT201 2.9 36.4 0.8
H081 A:WRT201 2.9 39.5 0.8
C16 A:WRT201 3.1 23.8 0.8
C18 A:WRT201 3.1 25.6 0.8
C3 A:WRT201 3.1 30.4 0.8
H3 A:WRT201 3.2 36.4 0.8
H051 A:WRT201 3.2 40.6 0.8
C10 A:WRT201 3.3 28.9 0.8
C24 A:WRT201 3.3 24.6 0.8
N02 A:WRT201 3.3 39.3 0.8
C22 A:WRT201 3.3 26.4 0.8
C05 A:WRT201 3.4 33.9 0.8
C08 A:WRT201 3.5 32.9 0.8
C11 A:WRT201 3.5 28.3 0.8
C30 A:WRT201 3.6 35.2 0.8
H301 A:WRT201 3.6 42.3 0.8
H291 A:WRT201 3.6 38.5 0.8
C03 A:WRT201 3.6 37.5 0.8
N09 A:WRT201 3.6 37.9 0.8
C07 A:WRT201 3.6 30.5 0.8
C29 A:WRT201 3.7 32.1 0.8
C04 A:WRT201 3.8 37.0 0.8
H A:GLY102 4.1 29.5 1.0
O A:HOH334 4.2 36.1 1.0
H072 A:WRT201 4.2 36.6 0.8
H031 A:WRT201 4.3 45.0 0.8
H032 A:WRT201 4.3 45.0 0.8
CB A:ASP101 4.3 22.9 1.0
O28 A:WRT201 4.3 28.5 0.8
H052 A:WRT201 4.4 40.6 0.8
C15 A:WRT201 4.4 28.2 0.8
O25 A:WRT201 4.5 24.3 0.8
H071 A:WRT201 4.5 36.6 0.8
H082 A:WRT201 4.5 39.5 0.8
H042 A:WRT201 4.5 44.4 0.8
C13 A:WRT201 4.6 30.5 0.8
H041 A:WRT201 4.6 44.4 0.8
C2 A:WRT201 4.6 38.6 0.8
O A:HOH329 4.6 29.4 1.0
HB3 A:ASP101 4.6 27.4 1.0
H302 A:WRT201 4.6 42.3 0.8
HB2 A:ASP101 4.7 27.4 1.0
C21 A:WRT201 4.7 28.7 0.8
H292 A:WRT201 4.8 38.5 0.8
C19 A:WRT201 4.8 30.5 0.8
HA A:ASP101 4.8 27.3 1.0
H12 A:WRT201 4.9 49.6 0.8
H13 A:WRT201 4.9 52.4 0.8
N A:GLY102 5.0 24.6 1.0

Reference:

Z.Alsalman, A.Roux-Gossart, O.Maury, E.Girard. Design of the Second Generation of Crystallophore For Protein Crystallography To Be Published.
Page generated: Fri Oct 11 08:55:35 2024

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