Terbium in PDB 8pob: Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-SO3

All present enzymatic activity of Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-SO3:
3.2.1.17;

The structure of Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-SO3, PDB code: 8pob was solved by Z.Alsalman, E.Girard, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.70 / 1.74
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	77.404, 77.404, 37.602, 90, 90, 90
R / Rfree (%)	18 / 22.8

The structure of Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-SO3 also contains other interesting chemical elements:

Sodium	(Na)	1 atom
Chlorine	(Cl)	6 atoms

The binding sites of Terbium atom in the Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-SO3 (pdb code 8pob). This binding sites where shown within 5.0 Angstroms radius around Terbium atom.
In total 2 binding sites of Terbium where determined in the Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-SO3, PDB code: 8pob:
Jump to Terbium binding site number: 1; 2;

Terbium binding site 1 out of 2 in the Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-SO3


Mono view


Stereo pair view

A full contact list of Terbium with other atoms in the Tb binding site number 1 of Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-SO3 within 5.0Å range: probe atom residue distance (Å) B Occ A:Tb201 b:40.8 occ:0.75 H052 A:ZW0203 1.7 55.6 0.8 N17 A:ZW0203 2.3 37.3 0.8 N23 A:ZW0203 2.3 34.1 0.8 OD2 A:ASP101 2.4 30.2 1.0 O27 A:ZW0203 2.4 34.6 0.8 O26 A:ZW0203 2.4 38.1 0.8 OD1 A:ASP101 2.5 29.9 1.0 N09 A:ZW0203 2.6 44.3 0.8 N02 A:ZW0203 2.7 45.4 0.8 CG A:ASP101 2.7 32.6 1.0 C05 A:ZW0203 2.8 46.5 0.8 H071 A:ZW0203 3.1 56.5 0.8 C29 A:ZW0203 3.1 43.8 0.8 C11 A:ZW0203 3.1 41.3 0.8 C16 A:ZW0203 3.2 37.9 0.8 C18 A:ZW0203 3.2 35.5 0.8 C10 A:ZW0203 3.2 41.0 0.8 H292 A:ZW0203 3.2 52.4 0.8 C22 A:ZW0203 3.2 35.8 0.8 C24 A:ZW0203 3.3 37.4 0.8 C30 A:ZW0203 3.3 44.0 0.8 H32 A:ZW0203 3.3 64.4 0.8 H302 A:ZW0203 3.3 52.7 0.8 C04 A:ZW0203 3.4 45.9 0.8 N06 A:ZW0203 3.4 50.3 0.8 H31 A:ZW0203 3.4 64.4 0.8 H051 A:ZW0203 3.4 55.6 0.8 C07 A:ZW0203 3.5 47.2 0.8 C08 A:ZW0203 3.5 45.2 0.8 C03 A:ZW0203 3.6 46.2 0.8 C3 A:ZW0203 3.6 53.8 0.8 H032 A:ZW0203 3.8 55.2 0.8 C01 A:ZW0203 3.8 46.5 0.8 H A:GLY102 4.1 42.1 1.0 H082 A:ZW0203 4.1 54.1 0.8 H042 A:ZW0203 4.1 54.9 0.8 H041 A:ZW0203 4.2 54.9 0.8 H291 A:ZW0203 4.2 52.4 0.8 CB A:ASP101 4.2 33.9 1.0 H301 A:ZW0203 4.3 52.7 0.8 H012 A:ZW0203 4.3 55.6 0.8 H081 A:ZW0203 4.3 54.1 0.8 O28 A:ZW0203 4.4 34.6 0.8 O25 A:ZW0203 4.5 36.6 0.8 C15 A:ZW0203 4.5 41.5 0.8 C19 A:ZW0203 4.5 42.0 0.8 C13 A:ZW0203 4.5 41.7 0.8 H031 A:ZW0203 4.5 55.2 0.8 O A:HOH314 4.5 42.2 1.0 H072 A:ZW0203 4.6 56.5 0.8 C21 A:ZW0203 4.6 37.9 0.8 HB3 A:ASP101 4.6 40.5 1.0 H011 A:ZW0203 4.6 55.6 0.8 HB2 A:ASP101 4.6 40.5 1.0 HA A:ASP101 4.8 47.0 1.0 N A:GLY102 4.9 35.2 1.0

Terbium binding site 2 out of 2 in the Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-SO3


Mono view


Stereo pair view

A full contact list of Terbium with other atoms in the Tb binding site number 2 of Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4-SO3 within 5.0Å range: probe atom residue distance (Å) B Occ A:Tb202 b:48.6 occ:0.15 H201 A:ZW0203 2.7 47.9 0.8 O A:HOH414 2.8 14.2 0.1 C20 A:ZW0203 2.9 40.0 0.8 C21 A:ZW0203 3.4 37.9 0.8 C19 A:ZW0203 3.6 42.0 0.8 H211 A:ZW0203 3.6 45.3 0.8 H191 A:ZW0203 3.8 50.3 0.8 C22 A:ZW0203 4.3 35.8 0.8 C11 A:ZW0203 4.5 41.3 0.8 N23 A:ZW0203 4.7 34.1 0.8

A.Roux, Z.Alsalman, T.Jiang, J.C.Mulatier, D.Pitrat, E.Dumont, F.Riobe, N.Gillet, E.Girard, O.Maury. Influence of Chemical Modifications of the Crystallophore on Protein Nucleating Properties and Supramolecular Interactions Network. Chemistry 00900 2024.
ISSN: ISSN 0947-6539
PubMed: 38738452
DOI: 10.1002/CHEM.202400900